Changelog
2025¶
Improve the robustness
v1.2.1 Release
Improve the robustness of task tracking and gene-based ESC functions.
Support Feather format for gene-score file
Allow the Feather format for --gene-score-file option to speed up the analysis.
Non-human GWAS support
Allow gene-based association analysis of non-human GWAS when a gene model is specified by a customized --gene-model-database.
LD clumping enhancement
Add LD clumping with data harmonization in the Annotation module.
LD blocking & clumping optimization
Improve algorithms of LD blocking and clumping.
Cell type prioritization
Develop scalable algorithms to prioritize cell types in large-scale datasets containing thousands of cell types or expression profiles.
PCMR analysis summary table
Generate a summary table for PCMR analysis.
Resource link update
Update some download links of KGGSum for resource data.
Data flow optimization
Optimize some internal data flows to speed up analysis and reduce memory usage.
Initial release
Release the first formal version of KGGSum.